CDS

Accession Number TCMCG017C16297
gbkey CDS
Protein Id OMO91492.1
Location complement(join(40356..41194,41757..41976,43834..44079))
GeneID InterPro:IPR001159
Organism Corchorus olitorius
locus_tag COLO4_18328

Protein

Length 434aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016447.1
Definition Double-stranded RNA-binding protein [Corchorus olitorius]
Locus_tag COLO4_18328

EGGNOG-MAPPER Annotation

COG_category J
Description Double-stranded RNA-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003725        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031048        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0070919        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACAAGAACCAGCTACAAGAGCTGGCGCAGAGGAGCTGCTTTAATCTTCCTTCCTACACCTGCATTAGGGAAGGTCCAGACCACGCGCCGAGGTTTAAAGCCACCGTTAACTTCAACGGCGAAACCTTTGAGAGTCCTCACTACTGTTCTACTCTCCGTCAAGCTGAACACTCCGCCGCCGAAGTCGCTCTCCAATCCCTCTCTAATCGTGGACCTTCTCACTCTCTCGCCGCCAGAATCCTAGATGAGACAGGGGTGTACAAAAACCTCTTACAAGAAATCGCACAAAGAGTTGGAGCTCCATTGCCGCAGTATACTACATTTAGATCAGGCCTTGGGCATCTACCTGTTTTTACGGGAACAGTTGAACTAGCTGGAATCACATTCACAGGGGACCCTGCCAAGAACAAGAAACAAGCAGAAAAGAATGCAGCCATGGCAGCTTGGACATCTCTTAAACAATTGGCAAAAGAAACTGCAAGTTCTTCTTCGGAGCCAGAGAACAATGACGAGCTTGAACAGATCACAATAGCTCGGGCCTTATTGAATTACCGAATAAAGGAAAAGATGGCTATGGCAAACACCTCCAATGCGCCAATACCATTTACAAAGAAGTTTCCTAGTCAGAATCTAAGACCAACAAGTCCACAACCTCCTGCTACCACCTCAAAAATCCTTCCCTTAATCTGCCCCAAGGTTATTCCTCGAAACAGATTGATGTCAGCAACAGCAAATGACAAGCCTTCAGTACCATCATTTCAAGCACTTACACCTGAAAGCCGTGGAGCTCGTCCACAGAAATTCCCTGCAGCTGGAGCAGCTCCTTATGTTCCCATGCGACAATTTAGAACACCTTGCCATAGCATGGCTCCACCAGTGACGATAAGAACAGCAGTGCCTGTTTTCTCTGCACCTCCTCGTCCAGCACCATCTACTGCATCTCCCCAGCCACCGGCATCTACTATTTCTACTCAGCCAGCGCAGTCCGTTCTTCCCACTCAGACGCCACAATCTGCAGTTCCCCATCAGCAATCACCCTCTACAGTTGCCACCCCGGTGCTGCGAGCCCCTCCTGTACGTATTGCTGCACCTATCACCATCAGGCAAGTAATTCCAGTTTTTGCTGCTCCACCAGCCCGAAAAGAAGAGAATCCATCTGTTAGAAATGAAGATGTTCAAACTGTTACTTCTTCTACCCTGCCCAACAAGTCACCTGTTCAACTAGAGGAAGCTGCTTGCACAACAGCAAAGAACCTGCAAGAATCTGAGACGGTACAGAACTTAGAACAACTCAAAATCTGA
Protein:  
MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSAAEVALQSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGDPAKNKKQAEKNAAMAAWTSLKQLAKETASSSSEPENNDELEQITIARALLNYRIKEKMAMANTSNAPIPFTKKFPSQNLRPTSPQPPATTSKILPLICPKVIPRNRLMSATANDKPSVPSFQALTPESRGARPQKFPAAGAAPYVPMRQFRTPCHSMAPPVTIRTAVPVFSAPPRPAPSTASPQPPASTISTQPAQSVLPTQTPQSAVPHQQSPSTVATPVLRAPPVRIAAPITIRQVIPVFAAPPARKEENPSVRNEDVQTVTSSTLPNKSPVQLEEAACTTAKNLQESETVQNLEQLKI